Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814865.1_cds_XP_016498089.1_12156
CDS Infomation

[gene=LOC107816860] [db_xref=GeneID:107816860] [protein=BTB/POZ domain-containing protein At5g48800-like] [protein_id=XP_016498089.1] [location=complement(join(42370..42888,43202..44374,44624..44690,45772..45833))] [gbkey=CDS]
Sequence

ATGGACAAACACCATTCTCAATTGTCTCTCGCCAAGTGTTCACGGCAGCGTTATAGTGAA
TGGGTGTTTCGGGATGTTCCAAGTGATATAACGATAGAAGTAGATGGTGGCACATTTTCA
TTGCATAAGTTTCCTCTAGTCTCCAGAAGTGGGCGAATTCGGAAGCTTGTAGCAGGGCAC
AGGGATTCTGATATATCAAGGATAGAGCTTCTTAGCCTACCAGGTGGAGCTGAATCATTT
GAGCTGGCAGCAAAATTCTGCTACGGTGTTAACTTCGAGATTACAGCTGCAAATGTTGCT
CAGCTTTGTTGTGTATCAGATTATCTTGAGATGACTGAGGACTATTCAAAGAACAACCTT
GGTTCCCGAGCTGAAGAATATCTTGATATTGTTGCTTGCAAGAATCTTGAAATGTGTGTT
GAAGTCCTGAAACAATGCGAAAACCTACTCCCTTTGGCTGATGAGCTGAAAATAGTTACC
CGATGCATTGATGCTATAGCCTCTAAGGCTTGTGTGGAGCAAATTGCTTCAAGTTTCTCG
CGCTTGGAATATAGTAGTTCCGGTAGACTCCATATGAACCGCCAAGCCAAGTGTGAAGGA
GACTGGTGGATAGAGGATTTGTCAGTTCTTCGCATTGACTTGTATCAACGAGTCATAACA
GCGATGAAATGTCGTGGTGTTAGGCCTGAAAGTATTGCAGCATCACTAGTGAACTACGCA
CAGAAGGAGTTGACAAAGAAGTCCACTTCCTGGAATCAATCGAGCCAACCCAAAGTTGAC
GTGGTTTCTCGTTCAAACGGCCATGAAAAAGTTGTGGTCGAGACAATTGTTAGCCTTATG
CCTGTTGAGAAATTGGTTGTTCCAATATCCTTTCTTTTTGGGTTGCTGAGAAGTGCAGTG
ATGCTCGACTGCACAGTTGCTTGTAGACTTGATCTTGAGAGGCGGATAGGATCTCAATTG
GATATAGCTACTCTCGATGATCTTCTAATTCCTTCCTTTCGTAATGCTGGTGACACATTA
TTTGACATTGACACAGTGCATAGAATCTTGGTTAATTTTTCTCAGCAGGAGGATAGTGAT
GAAGATATGGAGGATGTCTCAGTTTTTGAGTCTGATAGCGCTACTTCGCCATCCCAAACT
GCGTTATTCAAAGTCGCTAAACTGGTGGACAATTACCTTGCTGAAATTGCACCTGATGCA
AACCTAAAGCTGAACAAGTTCATAGCAATTGCCGAAAGCTTACCAGCACATGCTCGTACT
GTCCATGATGGACTTTACCGATCAATCGATGTCTACCTCAAAGCTCATCAGGCGTTATCA
GATCCAGATAGGAGGAGACTATGCAAGCTGATTGATTTTCAGAAGCTCTCACAAGAAGCT
GGATCACACGCTGCACAAAACGAACGCCTCCCACTCCAATCAATTGTACAGGTTCTATAT
TTCGAGCAACTGAGGCTTCGAAATGCCTTGTTTTGTTCTTATCCTGATGATGATCATAAG
CCAATGCACCAATCGTGGAGGATCAATAGTGGTGCTTTAAGTGCAGCTATGTCTCCCCGG
GATAATTATGCTTCTCTAAGACGAGAAAATAGGGAACTAAAACTTGAACTAGCACGAATG
AGGATGAGATTGAATGACCTGGAGAAAGATCATGTTTGTATGAAGAAAAATATGGAAAAA
TCTAACTCCCGGAGTTTCATGAGTAACTTCTCGAAAAAGATTGGCAAGTTCAACATTTTT
GGACATAGTTCTTCAAGGGAGTCAAGTTCTCCTTCAAAGAGATCACAAGTTACTGATTCT
AAGCTAACTGAAAGAACATGA

Peptide Sequence

PEP ID

XP_016498089.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein At5g48800-like [Nicotiana tabacum]
Sequence

MDKHHSQLSLAKCSRQRYSEWVFRDVPSDITIEVDGGTFSLHKFPLVSRSGRIRKLVAGH
RDSDISRIELLSLPGGAESFELAAKFCYGVNFEITAANVAQLCCVSDYLEMTEDYSKNNL
GSRAEEYLDIVACKNLEMCVEVLKQCENLLPLADELKIVTRCIDAIASKACVEQIASSFS
RLEYSSSGRLHMNRQAKCEGDWWIEDLSVLRIDLYQRVITAMKCRGVRPESIAASLVNYA
QKELTKKSTSWNQSSQPKVDVVSRSNGHEKVVVETIVSLMPVEKLVVPISFLFGLLRSAV
MLDCTVACRLDLERRIGSQLDIATLDDLLIPSFRNAGDTLFDIDTVHRILVNFSQQEDSD
EDMEDVSVFESDSATSPSQTALFKVAKLVDNYLAEIAPDANLKLNKFIAIAESLPAHART
VHDGLYRSIDVYLKAHQALSDPDRRRLCKLIDFQKLSQEAGSHAAQNERLPLQSIVQVLY
FEQLRLRNALFCSYPDDDHKPMHQSWRINSGALSAAMSPRDNYASLRRENRELKLELARM
RMRLNDLEKDHVCMKKNMEKSNSRSFMSNFSKKIGKFNIFGHSSSRESSSPSKRSQVTDS
KLTERT

Transcript Sequence

Gene sequence data has not been registered.